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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138242892_138243663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138242892 - 138243663

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

TCTCCCTTAACA

Flanking Amino Acid:

SIQAANDSVNRLPFVFSFTA

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

78.3

0.64

0.7

70.5

30.6

Minor 5ss

-1.9

3.1

41.6

Minor BPS

83.5

1.05

1.1

85.03

34.5

Associated Gene:

Gene:

SPAG1

Ensembl Gene ID:

ENSAPLG00000015431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041860

138241762 - 138248029

6268