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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138243817_138247189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138243817 - 138247189

Intron Length:

3373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TCTGTTTCAATG

Flanking Amino Acid:

NCSDCIQDCNRALELQAFSL

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

84.5

0.78

0.8

37.3

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

-0.2

1.7

54.05

42.3

Associated Gene:

Gene:

SPAG1

Ensembl Gene ID:

ENSAPLG00000015431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041860

138241762 - 138248029

6268

ENSAPLT00000016109

138229402 - 138268168

38767