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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138248030_138253414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138248030 - 138253414

Intron Length:

5385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

TGGCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

CGCGCCTCAGCC

Flanking Amino Acid:

EECGRSSGDKGRRQAAGPAA

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.9

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

68.9

0.43

0.9

62.3

34.7

Minor 5ss

37.1

-1.5

3.2

48.4

47.2

Minor BPS

45.5

-0.3

1.9

51.01

45.8

Associated Gene:

Gene:

SPAG1

Ensembl Gene ID:

ENSAPLG00000015431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016109

138229402 - 138268168

38767