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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138258173_138258657_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138258173 - 138258657

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGCCT

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGATGTATAATT

Flanking Amino Acid:

PLIEKKIDTTGMTKKEKIFI

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

61.6

42.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.6

0.71

0.8

Minor 5ss

33.6

-1.9

3.4

45.9

43.2

Minor BPS

49.3

0.03

70.33

40.9

Associated Gene:

Gene:

SPAG1

Ensembl Gene ID:

ENSAPLG00000015431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016109

138229402 - 138268168

38767