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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138330257_138336111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138330257 - 138336111

Intron Length:

5855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTCTGTTTTATT

Flanking Amino Acid:

HPFKICKQAQFLYATYIAPS

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

78.6

0.71

78.6

Major PPT

86.7

0.83

0.8

81.8

34.6

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

52.2

0.15

2.1

75.01

42.5

Associated Gene:

Gene:

RGS22

Ensembl Gene ID:

ENSAPLG00000016769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039049

138298781 - 138359323

60543

ENSAPLT00000033484

138328503 - 138357832

29330

ENSAPLT00000031150

138318484 - 138359323

40840