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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138340053_138340549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138340053 - 138340549

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TGCAAGTGAAAT

Flanking Amino Acid:

HQESVSKKDESTVADTGLPS

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

71.6

0.54

33.1

Major PPT

90.7

0.92

0.6

89.3

19.6

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

40.2

-0.6

2.2

57.04

44.5

Associated Gene:

Gene:

RGS22

Ensembl Gene ID:

ENSAPLG00000016769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033484

138328503 - 138357832

29330

ENSAPLT00000031150

138318484 - 138359323

40840