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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138344691_138346477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138344691 - 138346477

Intron Length:

1787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCAACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTTGTTCAACT

Flanking Amino Acid:

EQRGAEGQAKVKDKTEDLLS

Intron Amino Acid Position:

676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

70.8

0.47

0.9

64.4

36.7

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

65.4

0.56

87.98

37.6

Associated Gene:

Gene:

RGS22

Ensembl Gene ID:

ENSAPLG00000016769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039049

138298781 - 138359323

60543

ENSAPLT00000033484

138328503 - 138357832

29330

ENSAPLT00000031150

138318484 - 138359323

40840