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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138351816_138353362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138351816 - 138353362

Intron Length:

1547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAA

U12 Branch Point Sequence:

TCTTTCTGCACA

Flanking Amino Acid:

LGPYIFREAQMTIFALLFKF

Intron Amino Acid Position:

811

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

55.5

0.14

1.2

37.9

Major PPT

79.6

0.67

0.9

75.6

32.9

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

56.3

0.19

1.9

71.44

Associated Gene:

Gene:

RGS22

Ensembl Gene ID:

ENSAPLG00000016769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031150

138318484 - 138359323

40840

ENSAPLT00000039049

138298781 - 138359323

60543

ENSAPLT00000033484

138328503 - 138357832

29330