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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138390987_138391637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138390987 - 138391637

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAATTA

5'SS Class:

major

3'SS Sequence:

TTTGGTAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CCTTTGGTAACA

Flanking Amino Acid:

QAPNSHVKYVWKMLQSLGRP

Intron Amino Acid Position:

3868

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

72.9

32.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.6

0.42

62.4

42.4

Minor 5ss

-1

3.2

52.8

46.3

Minor BPS

45.6

-0.3

2.6

61.69

45.2

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293