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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138391741_138394193_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138391741 - 138394193

Intron Length:

2453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

GTTCTCTTACCA

Flanking Amino Acid:

AAELVSQTGYGILHGAGLSQ

Intron Amino Acid Position:

3834

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

78.7

31.6

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

78.3

0.64

0.8

30.4

Minor 5ss

39.8

-1.1

53.4

43.8

Minor BPS

63.4

0.42

1.6

73.25

38.4

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293