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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138402417_138406999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138402417 - 138406999

Intron Length:

4583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TTCTCCATACAG

Flanking Amino Acid:

HYAAGALFRAGWVVGSLEIL

Intron Amino Acid Position:

3659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

84.4

33.5

Major BPS

64.7

0.37

1.3

74.7

Major PPT

82.6

0.73

0.8

77.4

30.3

Minor 5ss

33.8

-1.8

2.6

44.2

Minor BPS

48.9

-0.2

2.1

61.5

45.9

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015615

138383975 - 138838267

454293

ENSAPLT00000029347

138383975 - 138838267

454293