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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138415344_138416442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138415344 - 138416442

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACTAC

U12 Branch Point Sequence:

GTCCCCTTACTA

Flanking Amino Acid:

CISKPYSGEEEFHSPDSTVF

Intron Amino Acid Position:

3141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

52.2

0.06

1.3

52.8

42.4

Major PPT

91.7

0.94

0.6

84.4

30.5

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

58.2

0.26

1.7

65.34

41.4

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293