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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138418090_138419534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138418090 - 138419534

Intron Length:

1445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TGTTTTTGAACA

Flanking Amino Acid:

AWPYNRKDSDSNEQLSQWDS

Intron Amino Acid Position:

2961

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

75.1

0.62

65.6

Major PPT

0.59

73.3

40.9

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

68.6

0.58

1.3

76.57

34.1

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293