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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138420387_138420540_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138420387 - 138420540

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TCAGCATGAAAT

Flanking Amino Acid:

EPNSHVQQRIIVFSPLFIVR

Intron Amino Acid Position:

2846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

76.2

32.6

Major BPS

0.3

62.3

30.4

Major PPT

91.3

0.93

0.6

88.5

Minor 5ss

37.9

-1.4

2.7

45.5

37.1

Minor BPS

-0.1

1.9

64.48

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293