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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138420625_138420771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138420625 - 138420771

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TATCTGCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTGGCATAATG

Flanking Amino Acid:

KDTEHSTVIQVPSSKSSITY

Intron Amino Acid Position:

2818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

72.7

0.51

65.8

39.8

Minor 5ss

43.9

-0.7

2.8

58.4

46.1

Minor BPS

49.1

-0.2

2.2

63.85

44.5

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015615

138383975 - 138838267

454293

ENSAPLT00000029347

138383975 - 138838267

454293