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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138438513_138440353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138438513 - 138440353

Intron Length:

1841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTACTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TGTTCTGTTACT

Flanking Amino Acid:

LCHHLDQLGTAPPKFLQPFL

Intron Amino Acid Position:

2507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

84.5

0.78

0.8

81.3

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

54.3

0.22

2.3

80.6

41.3

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293