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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138440536_138447774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138440536 - 138447774

Intron Length:

7239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCTTA

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

AACTGCTGAACC

Flanking Amino Acid:

NSSQNVADDQSSESESGSQS

Intron Amino Acid Position:

2446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

76.9

34.6

Major BPS

0.42

1.1

57.3

41.7

Major PPT

73.9

0.54

0.8

32.2

Minor 5ss

47.5

-0.2

2.8

64.9

46.3

Minor BPS

52.8

0.07

1.9

62.98

42.1

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293