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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138492771_138501947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138492771 - 138501947

Intron Length:

9177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTATCACCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATATTATTAATG

Flanking Amino Acid:

KGVASDYKCTDPGKTLPEAL

Intron Amino Acid Position:

2001

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

73.4

0.53

0.8

67.1

34.2

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

59.7

0.17

1.6

63.57

38.3

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293