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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138573995_138578321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138573995 - 138578321

Intron Length:

4327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGACTAT

5'SS Class:

major

3'SS Sequence:

CTTCTAACTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTCTTCTAACT

Flanking Amino Acid:

PKEDDHHNAEANPAIKEDTL

Intron Amino Acid Position:

1571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

68.2

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.3

0.61

0.9

70.2

Minor 5ss

43.5

-0.7

3.4

63.6

48.1

Minor BPS

59.4

0.37

1.7

77.41

39.2

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293