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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138578728_138580408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138578728 - 138580408

Intron Length:

1681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGAATC

5'SS Class:

major

3'SS Sequence:

CTTCTTGAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATTTTTTAATT

Flanking Amino Acid:

FSNFSGFFPSTTAKLLDGSH

Intron Amino Acid Position:

1436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.3

37.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.4

0.44

65.7

38.9

Minor 5ss

40.9

-1

3.1

41.2

Minor BPS

72.8

0.79

1.1

36.6

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015615

138383975 - 138838267

454293