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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138580551_138582678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138580551 - 138582678

Intron Length:

2128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCATTACCTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCATTACCT

Flanking Amino Acid:

ESFNIDHYRNSLGEDSWSLG

Intron Amino Acid Position:

1388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

77.3

37.6

Major BPS

84.8

0.86

85.7

34.9

Major PPT

64.7

0.33

1.1

61.6

39.2

Minor 5ss

36.9

-1.5

2.9

51.8

44.6

Minor BPS

0.58

1.9

86.23

39.4

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015615

138383975 - 138838267

454293