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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138583968_138597530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138583968 - 138597530

Intron Length:

13563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CTTTTCTCAGCT

Flanking Amino Acid:

PSADIGTTTEGDSLQGGDDS

Intron Amino Acid Position:

1293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

0.52

1.5

79.6

35.6

Major PPT

84.3

0.77

0.7

79.8

32.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

59.8

0.39

1.8

79.74

42.4

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293