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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138597738_138602565_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138597738 - 138602565

Intron Length:

4828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTACA

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

GCTTCCTTAATG

Flanking Amino Acid:

SLEIKCSNPQVQLLYELAEI

Intron Amino Acid Position:

1224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

72.7

38.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

-2.2

2.7

35.2

40.7

Minor BPS

76.9

0.71

1.3

71.98

41.2

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293