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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138619021_138630255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138619021 - 138630255

Intron Length:

11235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGCGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TGCTCAGTATAT

Flanking Amino Acid:

SSPVKTKTITESRPLSLPVK

Intron Amino Acid Position:

1029

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.1

31.9

Major BPS

66.1

0.4

31.5

Major PPT

69.1

0.43

70.2

41.3

Minor 5ss

44.3

-0.6

2.8

57.2

47.1

Minor BPS

41.9

-0.5

2.4

63.12

46.4

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293