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Intron Name: Anas_platyrhynchos_platyrhynchos_2_13864892_13912384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13864892 - 13912384

Intron Length:

47493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTGCCTTTTATG

Flanking Amino Acid:

VTRYKKAIAKDPNYWIQVHR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

77.5

0.62

0.9

72.7

36.6

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

48.8

-0.2

1.7

51.99

43.2

Associated Gene:

Gene:

PARD3

Ensembl Gene ID:

ENSAPLG00000014767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015447

13864772 - 14305998

441227

ENSAPLT00000041564

13864772 - 14307028

442257

ENSAPLT00000003606

13864772 - 14305998

441227

ENSAPLT00000038237

13864772 - 14307028

442257

ENSAPLT00000003604

13864772 - 14305998

441227

ENSAPLT00000021470

13864772 - 14307028

442257

ENSAPLT00000019870

13864772 - 14307028

442257

ENSAPLT00000047719

13864772 - 14307028

442257