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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138742893_138761151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138742893 - 138761151

Intron Length:

18259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTCTTAATG

Flanking Amino Acid:

YGKLIKFPKYWNKRAHVPLT

Intron Amino Acid Position:

778

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.1

0.45

1.1

66.4

43.3

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

83.3

0.91

1.1

82.74

31.8

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293