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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138761277_138762734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138761277 - 138762734

Intron Length:

1458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

GATTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATATGCTGACCA

Flanking Amino Acid:

HYCYSHCYLKVFGFQAALTS

Intron Amino Acid Position:

737

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

87.1

0.84

0.8

84.8

35.4

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

47.8

-0.1

2.1

63.62

42.4

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293