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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138779348_138790373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138779348 - 138790373

Intron Length:

11026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTATTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTGACTTAGCT

Flanking Amino Acid:

HTKDMLGNITGTEDETGSVM

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

1.1

87.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

63.3

0.3

1.1

64.5

39.7

Minor 5ss

44.9

-0.6

2.6

44.4

Minor BPS

63.5

0.5

1.9

85.1

41.2

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015615

138383975 - 138838267

454293

ENSAPLT00000029347

138383975 - 138838267

454293