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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138790549_138793248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138790549 - 138793248

Intron Length:

2700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTATC

5'SS Class:

major

3'SS Sequence:

TTTCATTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

LNSKMPSIIKIHTLVESLKL

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

35.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.79

0.7

80.3

31.4

Minor 5ss

40.6

-1

3.1

54.1

37.3

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

VPS13B

Ensembl Gene ID:

ENSAPLG00000014920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029347

138383975 - 138838267

454293

ENSAPLT00000015615

138383975 - 138838267

454293