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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139133274_139148731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139133274 - 139148731

Intron Length:

15458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTGATCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTTTTGTATTT

Flanking Amino Acid:

LSGPWYSKHKTQLLGVLLAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.1

0.61

69.8

41.2

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

48.4

-0

2.1

72.97

39.1

Associated Gene:

Gene:

NIPAL2

Ensembl Gene ID:

ENSAPLG00000014788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015417

139132591 - 139178681

46091