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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139160284_139162287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139160284 - 139162287

Intron Length:

2004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

TTTTCTTTAAAG

Flanking Amino Acid:

KQTVRAADILGGTLAVAGTY

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.2

30.8

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

84.5

0.78

0.9

86.4

25.2

Minor 5ss

34.6

-1.8

2.7

41.5

Minor BPS

78.4

0.75

1.3

80.63

34.8

Associated Gene:

Gene:

NIPAL2

Ensembl Gene ID:

ENSAPLG00000014788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015417

139132591 - 139178681

46091