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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139161884_139162287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

139161884 - 139162287

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

TTTTCTTTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

72.7

38.8

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

84.5

0.78

0.9

86.4

25.2

Minor 5ss

40.2

-1.1

2.9

52.9

44.1

Minor BPS

78.4

0.75

1.3

80.63

34.8

Associated Gene:

Gene:

NIPAL2

Ensembl Gene ID:

ENSAPLG00000014788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040646

139161308 - 139178681

17374