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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139162410_139167784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139162410 - 139167784

Intron Length:

5375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTCTCTTTTATT

Flanking Amino Acid:

LVSWPFLVYVILEIITFCIL

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

88.9

0.87

0.7

81.1

35.5

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

68.7

0.67

1.6

83.34

38.2

Associated Gene:

Gene:

NIPAL2

Ensembl Gene ID:

ENSAPLG00000014788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040646

139161308 - 139178681

17374

ENSAPLT00000015417

139132591 - 139178681

46091