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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139167882_139172463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139167882 - 139172463

Intron Length:

4582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GCCCTGCTAATT

Flanking Amino Acid:

MILLMMVALLASLTVIAVKA

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

36.4

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

87.6

0.85

0.6

22.6

Minor 5ss

30.3

-2.3

3.2

31.5

42.2

Minor BPS

41.2

-0.5

2.2

53.82

42.1

Associated Gene:

Gene:

NIPAL2

Ensembl Gene ID:

ENSAPLG00000014788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040646

139161308 - 139178681

17374

ENSAPLT00000015417

139132591 - 139178681

46091