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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139176860_139178168_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139176860 - 139178168

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTAATAATA

Flanking Amino Acid:

ALLSVFMFLFGCLLSFLGVF

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.3

0.82

0.8

80.8

36.4

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

51.9

0.06

1.8

70.86

34.7

Associated Gene:

Gene:

NIPAL2

Ensembl Gene ID:

ENSAPLG00000014788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040646

139161308 - 139178681

17374

ENSAPLT00000015417

139132591 - 139178681

46091