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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139178264_139178586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139178264 - 139178586

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCATTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTTCTCTCACCC

Flanking Amino Acid:

VPYIDCGRIPGQKLTGKIQP

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.5

41.9

Major BPS

72.7

0.56

30.1

Major PPT

70.3

0.46

0.8

68.6

31.6

Minor 5ss

35.3

-1.7

2.7

39.4

40.3

Minor BPS

49.3

-0

1.9

63.43

42.2

Associated Gene:

Gene:

NIPAL2

Ensembl Gene ID:

ENSAPLG00000014788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040646

139161308 - 139178681

17374

ENSAPLT00000015417

139132591 - 139178681

46091