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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139205098_139205978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139205098 - 139205978

Intron Length:

881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

GATTTATCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

ATATTCTTACCT

Flanking Amino Acid:

LEATLLEKFKRRPPAKRANY

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

57.5

46.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

66.3

0.37

64.8

41.2

Minor 5ss

34.9

-1.7

3.4

48.5

47.1

Minor BPS

69.2

0.68

1.6

82.83

38.2

Associated Gene:

Gene:

POP1

Ensembl Gene ID:

ENSAPLG00000014418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015047

139203292 - 139225723

22432