Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_139206134_139207094_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139206134 - 139207094

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

GTTTTTATAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTTTATAACA

Flanking Amino Acid:

GWGMAFWIPFIYRGVRVGGL

Intron Amino Acid Position:

626

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

70.5

33.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.6

0.64

74.5

38.9

Minor 5ss

35.6

-1.6

3.3

49.4

41.4

Minor BPS

65.7

0.49

1.6

76.59

Associated Gene:

Gene:

POP1

Ensembl Gene ID:

ENSAPLG00000014418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015047

139203292 - 139225723

22432