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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139216677_139217476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139216677 - 139217476

Intron Length:

800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGAAA

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

CTTGAGTTAATT

Flanking Amino Acid:

ETLKAASLQTEMADSESELN

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

37.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

85.2

0.79

0.9

76.9

42.1

Minor 5ss

33.8

-1.8

3.2

45.1

43.8

Minor BPS

48.9

-0

2.3

72.18

45.2

Associated Gene:

Gene:

POP1

Ensembl Gene ID:

ENSAPLG00000014418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015047

139203292 - 139225723

22432