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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139230380_139231810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139230380 - 139231810

Intron Length:

1431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCAATTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTGTTTTCAATT

Flanking Amino Acid:

FNDINDIYKQFFKSNFPARA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

84.3

0.77

0.8

78.1

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

64.6

0.54

1.5

79.17

37.8

Associated Gene:

Gene:

RIDA

Ensembl Gene ID:

ENSAPLG00000014330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027836

139226026 - 139232931

6906

ENSAPLT00000014945

139227241 - 139232349

5109