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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139257704_139258639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139257704 - 139258639

Intron Length:

936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGCTGT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAG

U12 Branch Point Sequence:

CAGCATTTAAGT

Flanking Amino Acid:

RLRKTGPQSSAKDKDQCKCE

Intron Amino Acid Position:

1264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.3

61.8

45.3

Major BPS

66.8

0.42

1.5

75.7

36.5

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

40.5

-1.1

3.2

56.7

47.5

Minor BPS

47.1

-0.1

1.8

59.14

44.1

Associated Gene:

Gene:

MATN2

Ensembl Gene ID:

ENSAPLG00000014019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020971

139254171 - 139335360

81190