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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139417618_139418131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139417618 - 139418131

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

ATTTCCATATTT

Flanking Amino Acid:

PEEALSDVQKASDNEREKAE

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

72.3

37.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

68.9

0.43

1.1

72.2

36.5

Minor 5ss

31.5

-2.1

3.5

47.6

47.9

Minor BPS

62.3

0.46

1.9

83.51

37.5

Associated Gene:

Gene:

MTDH

Ensembl Gene ID:

ENSAPLG00000013199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048026

139411294 - 139440565

29272

ENSAPLT00000020316

139411294 - 139440565

29272

ENSAPLT00000013776

139411294 - 139440565

29272