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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139420344_139422306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139420344 - 139422306

Intron Length:

1963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TATTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTTATT

Flanking Amino Acid:

SSFGLTPGVSGSNSEPVSQA

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.77

0.8

77.9

30.4

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

62.9

0.49

1.9

83.69

36.7

Associated Gene:

Gene:

MTDH

Ensembl Gene ID:

ENSAPLG00000013199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048026

139411294 - 139440565

29272

ENSAPLT00000020316

139411294 - 139440565

29272