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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139429735_139434223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139429735 - 139434223

Intron Length:

4489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTC

Flanking Amino Acid:

PLDAEKKNEKSKKKKKSKGD

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

30.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.3

0.73

0.8

75.2

Minor 5ss

37.3

-1.4

2.8

49.7

46.6

Minor BPS

61.5

0.34

1.5

70.16

35.8

Associated Gene:

Gene:

MTDH

Ensembl Gene ID:

ENSAPLG00000013199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013776

139411294 - 139440565

29272

ENSAPLT00000020316

139411294 - 139440565

29272