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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139577543_139604484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139577543 - 139604484

Intron Length:

26942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TATCTCACAACT

Flanking Amino Acid:

INYWMRDGVPVICTGSSQSW

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

77.2

32.9

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

77.5

0.62

0.7

71.5

26.6

Minor 5ss

32.1

-2

41.3

44.8

Minor BPS

53.4

0.18

1.8

76.2

39.6

Associated Gene:

Gene:

CPQ

Ensembl Gene ID:

ENSAPLG00000013098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033031

139576799 - 139705570

128772