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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139604687_139615630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139604687 - 139615630

Intron Length:

10944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTACATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

CTTTCCTTACAT

Flanking Amino Acid:

GAEQYYQLHKENISNFDIVM

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.9

28.7

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

68.7

0.42

66.3

39.6

Minor 5ss

37.5

-1.4

2.8

51.6

44.9

Minor BPS

68.9

0.67

1.8

85.06

41.4

Associated Gene:

Gene:

CPQ

Ensembl Gene ID:

ENSAPLG00000013098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013642

139545983 - 139705570

159588

ENSAPLT00000040152

139542415 - 139705570

163156

ENSAPLT00000033031

139576799 - 139705570

128772

ENSAPLT00000027474

139566971 - 139714212

147242

ENSAPLT00000025619

139546385 - 139705570

159186

ENSAPLT00000044006

139480013 - 139705570

225558