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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139615723_139632034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139615723 - 139632034

Intron Length:

16312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

AATTATATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TAGTACTAAAAA

Flanking Amino Acid:

WEALSLIKDLGLRPKRTLRM

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

84.2

33.9

Major BPS

81.6

0.78

0.8

24.9

Major PPT

71.6

0.49

42.2

Minor 5ss

40.6

-1.1

51.6

45.1

Minor BPS

49.5

-0

1.9

42.7

Associated Gene:

Gene:

CPQ

Ensembl Gene ID:

ENSAPLG00000013098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027474

139566971 - 139714212

147242

ENSAPLT00000025619

139546385 - 139705570

159186

ENSAPLT00000044006

139480013 - 139705570

225558

ENSAPLT00000013642

139545983 - 139705570

159588

ENSAPLT00000040152

139542415 - 139705570

163156

ENSAPLT00000033031

139576799 - 139705570

128772