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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139695436_139705109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139695436 - 139705109

Intron Length:

9674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGTTT

5'SS Class:

major

3'SS Sequence:

TACTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

AGCAGCTTAAAA

Flanking Amino Acid:

LGSSVATPPEGITAEVMVVA

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

77.5

33.1

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

86.9

0.83

0.7

84.8

29.6

Minor 5ss

37.3

-1.4

3.5

55.5

48.6

Minor BPS

48.4

-0.1

1.9

56.73

Associated Gene:

Gene:

CPQ

Ensembl Gene ID:

ENSAPLG00000013098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027474

139566971 - 139714212

147242

ENSAPLT00000025619

139546385 - 139705570

159186

ENSAPLT00000044006

139480013 - 139705570

225558

ENSAPLT00000013642

139545983 - 139705570

159588

ENSAPLT00000040152

139542415 - 139705570

163156

ENSAPLT00000033031

139576799 - 139705570

128772