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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139705571_139714158_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139705571 - 139714158

Intron Length:

8588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

MPSAEKKRGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.5

37.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.7

0.62

0.8

73.7

29.9

Minor 5ss

40.3

-1.1

3.4

62.1

42.3

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

CPQ

Ensembl Gene ID:

ENSAPLG00000013098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027474

139566971 - 139714212

147242