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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139843972_139845277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139843972 - 139845277

Intron Length:

1306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCGGCA

5'SS Class:

major

3'SS Sequence:

TTTTATTTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

AGTGTTTTATTT

Flanking Amino Acid:

ASWLHSKFSRAGADNSPPKH

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.41

1.2

59.3

39.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

89.3

0.89

0.7

88.4

28.3

Minor 5ss

41.1

-1

3.4

56.5

47.9

Minor BPS

49.8

0.06

1.6

65.87

39.8

Associated Gene:

Gene:

PTDSS1

Ensembl Gene ID:

ENSAPLG00000012776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023868

139843575 - 139868313

24739

ENSAPLT00000013338

139843651 - 139868313

24663